EnhancerDB
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  3. rs143417586[chr2:38944028]
Enhancers that have rs143417586[chr2:38944028]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs143417586[chr2:38944028]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38944012 38944033 IRF1 JASPAR yes 73169176
chr2 38944014 38944029 IRF9 JASPAR yes 73169177
chr2 38944015 38944029 IRF8 JASPAR yes 73169178
chr2 38944016 38944030 STAT1 JASPAR yes 73169179
chr2 38944016 38944031 STAT2 JASPAR yes 73169180
Genes associated with rs143417586[chr2:38944028], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More