EnhancerDB
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  3. rs143483416[chr17:78719369]
Enhancers that have rs143483416[chr17:78719369]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78718165 78742035 enh4636
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs143483416[chr17:78719369]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78719359 78719370 USF1 JASPAR yes 56274155
chr17 78719359 78719370 USF2 JASPAR yes 56274156
chr17 78719360 78719370 SREBF2 JASPAR yes 56274157
chr17 78719360 78719370 TFE3 JASPAR yes 56274158
chr17 78719360 78719370 TFEB JASPAR yes 56274159
chr17 78719360 78719370 TFEC JASPAR yes 56274160
chr17 78719366 78719378 PKNOX1 JASPAR yes 56274161
chr17 78719366 78719378 PKNOX2 JASPAR yes 56274162
chr17 78719366 78719378 TGIF1 JASPAR yes 56274163
chr17 78719366 78719378 TGIF2 JASPAR yes 56274164
Genes associated with rs143483416[chr17:78719369], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More