EnhancerDB
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  3. rs143499711[chr19:10854224]
Enhancers that have rs143499711[chr19:10854224]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10832365 10873258 enh5002
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143499711[chr19:10854224]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10854213 10854224 FOSL2 JASPAR yes 112434894
chr19 10854215 10854228 SMAD2 JASPAR yes 112434895
chr19 10854218 10854228 TBR1 JASPAR yes 112434896
chr19 10854219 10854229 TBX21 JASPAR yes 112434897
chr19 10854220 10854228 MGA JASPAR yes 112434898
chr19 10854220 10854228 TBX15 JASPAR yes 112434899
chr19 10854220 10854228 TBX1 JASPAR yes 112434900
chr19 10854220 10854228 TBX4 JASPAR yes 112434901
chr19 10854220 10854228 TBX5 JASPAR yes 112434902
chr19 10854220 10854229 ZEB1 JASPAR yes 112434903
chr19 10854220 10854232 PKNOX1 JASPAR yes 112434904
chr19 10854220 10854232 TGIF1 JASPAR yes 112434905
chr19 10854220 10854233 ZBTB18 JASPAR yes 112434906
chr19 10854221 10854231 FIGLA JASPAR yes 112434907
chr19 10854221 10854231 ID4 JASPAR yes 112434908
chr19 10854221 10854231 TCF3 JASPAR yes 112434909
chr19 10854221 10854231 TCF4 JASPAR yes 112434910
chr19 10854222 10854231 SNAI2 JASPAR yes 112434911
chr19 10854223 10854228 USF2 TRANSFAC yes 112434912
Genes associated with rs143499711[chr19:10854224], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More