EnhancerDB
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  3. rs143535562[chr12:53768166]
Enhancers that have rs143535562[chr12:53768166]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53754815 53768707 enh2366
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs143535562[chr12:53768166]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53767371 53768334 ZNF143 GTRD no Epithelial (MCF-7) 21549393
chr12 53767703 53768364 TCF7L2 GTRD no Colon (HCT116) 21549420
chr12 53768155 53768175 TP63 JASPAR yes 120984002
chr12 53768156 53768174 TP73 JASPAR yes 120984003
chr12 53768166 53768185 PAX5 JASPAR yes 120984004
Genes associated with rs143535562[chr12:53768166], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More