EnhancerDB
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  3. rs143544211[chr19:6100895]
Enhancers that have rs143544211[chr19:6100895]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6084063 6113078 enh17886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143544211[chr19:6100895]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6100885 6100895 PAX3 JASPAR yes 112257300
chr19 6100885 6100895 PAX7 JASPAR yes 112257301
chr19 6100888 6100896 ISX JASPAR yes 112257302
chr19 6100888 6100896 LHX9 JASPAR yes 112257303
chr19 6100888 6100896 LMX1B JASPAR yes 112257304
chr19 6100888 6100896 PRRX1 JASPAR yes 112257305
chr19 6100888 6100896 RAX2 JASPAR yes 112257306
chr19 6100888 6100896 SHOX JASPAR yes 112257307
chr19 6100888 6100896 UNCX JASPAR yes 112257308
chr19 6100888 6100901 DUXA JASPAR yes 112257309
chr19 6100889 6100900 DUX4 JASPAR yes 112257310
chr19 6100889 6100900 PHOX2A JASPAR yes 112257311
chr19 6100889 6100900 PROP1 JASPAR yes 112257312
chr19 6100891 6100896 MYB TRANSFAC yes 112257313
chr19 6100892 6100905 DUXA JASPAR yes 112257314
chr19 6100893 6100904 PHOX2A JASPAR yes 112257315
chr19 6100893 6100909 POU4F2 JASPAR yes 112257316
chr19 6100893 6100909 POU4F3 JASPAR yes 112257317
chr19 6100894 6100904 PAX3 JASPAR yes 112257318
chr19 6100894 6100904 PAX7 JASPAR yes 112257319
chr19 6100895 6100909 POU4F1 JASPAR yes 112257320
Genes associated with rs143544211[chr19:6100895], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More