EnhancerDB
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  3. rs143547203[chr12:46944940]
Enhancers that have rs143547203[chr12:46944940]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46935165 46958895 enh14680
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs143547203[chr12:46944940]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46943808 46944975 ZBTB33 GTRD no Lung (A549) 108027823
chr12 46943869 46945265 ZBTB33 GTRD no Brain (SK-N-SH) 108027825
chr12 46944761 46945265 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542424
chr12 46944780 46945081 ZNF143 GTRD no Epithelial (MCF-7) 21542425
chr12 46944876 46945340 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21542426
chr12 46944891 46945117 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21542427
chr12 46944920 46944940 RREB1 JASPAR yes 120636668
chr12 46944921 46944941 RREB1 JASPAR yes 120636669
chr12 46944924 46944944 RREB1 JASPAR yes 120636670
chr12 46944925 46944945 RREB1 JASPAR yes 120636671
chr12 46944928 46944948 RREB1 JASPAR yes 120636672
chr12 46944929 46944949 RREB1 JASPAR yes 120636673
chr12 46944932 46944952 RREB1 JASPAR yes 120636674
chr12 46944933 46944945 FOXI1 JASPAR yes 120636675
chr12 46944933 46944953 RREB1 JASPAR yes 120636676
chr12 46944936 46944956 RREB1 JASPAR yes 120636677
chr12 46944937 46944949 FOXI1 JASPAR yes 120636678
Genes associated with rs143547203[chr12:46944940], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More