EnhancerDB
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  3. rs143560589[chr1:27927715]
Enhancers that have rs143560589[chr1:27927715]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs143560589[chr1:27927715]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27927714 27927730 POU4F2 JASPAR yes 27714942
chr1 27927714 27927730 POU4F3 JASPAR yes 27714943
chr1 27927715 27927725 HOXA13 JASPAR yes 27714944
Genes associated with rs143560589[chr1:27927715], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More