EnhancerDB
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  3. rs143561864[chr2:28870714]
Enhancers that have rs143561864[chr2:28870714]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143561864[chr2:28870714]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28870712 28870728 RFX2 JASPAR yes 72663792
chr2 28870712 28870728 RFX3 JASPAR yes 72663793
chr2 28870712 28870728 RFX4 JASPAR yes 72663794
chr2 28870712 28870728 RFX5 JASPAR yes 72663795
chr2 28870713 28870732 RFX2 JASPAR yes 72663796
Genes associated with rs143561864[chr2:28870714], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More