EnhancerDB
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  3. rs143561938[chr17:80449424]
Enhancers that have rs143561938[chr17:80449424]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80448407 80467804 enh4648
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs143561938[chr17:80449424]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80448031 80451023 TCF7L2 GTRD no Colon (HCT116) 21800291
chr17 80448126 80450222 TCF7L2 GTRD no Colon (HCT116) 21800292
chr17 80448893 80450195 TCF7L2 GTRD no Colon (HCT116) 21800298
chr17 80448905 80452854 TCF7L2 GTRD no Colon (HCT116) 21800299
chr17 80448941 80449919 TCF7L2 GTRD no Colon (HCT116) 21800300
chr17 80449126 80449915 ZNF143 GTRD no Epithelial (MCF-7) 21800302
chr17 80449312 80450008 ZNF274 GTRD no Bone Marrow (K562) 21800303
chr17 80449418 80449426 E2F1 JASPAR yes 56366984
Genes associated with rs143561938[chr17:80449424], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More