EnhancerDB
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  3. rs143571309[chr19:10842261]
Enhancers that have rs143571309[chr19:10842261]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10832365 10873258 enh5002
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143571309[chr19:10842261]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10842232 10842552 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21848911
chr19 10842232 10842552 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108383750
chr19 10842260 10842270 SREBF2 JASPAR yes 112432845
chr19 10842260 10842271 USF1 JASPAR yes 112432846
chr19 10842260 10842271 USF2 JASPAR yes 112432847
Genes associated with rs143571309[chr19:10842261], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More