EnhancerDB
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  3. rs143589452[chr15:39917069]
Enhancers that have rs143589452[chr15:39917069]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 39911425 39925936 enh31312
Astrocyte Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr15 39916943 39917393 vista19699
VISTA
Transcript factors that have rs143589452[chr15:39917069]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 39916917 39917361 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108133111
chr15 39916919 39917289 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649027
chr15 39916919 39917289 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108133112
chr15 39916962 39917318 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108133113
chr15 39916980 39917290 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649028
chr15 39916980 39917290 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108133114
chr15 39917003 39917229 FOS UCSC Txn Factor no Conserved 108133115
chr15 39917015 39917231 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21649029
chr15 39917015 39917231 FOSL2 UCSC Txn Factor no Conserved 108133116
chr15 39917015 39917231 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108133117
chr15 39917053 39917072 RFX2 JASPAR yes 22902716
chr15 39917053 39917072 RFX2 JASPAR yes 70510522
chr15 39917059 39917170 JUN UCSC Txn Factor no Conserved 108133118
chr15 39917067 39917075 FOXL1 JASPAR yes 22902717
chr15 39917067 39917075 FOXL1 JASPAR yes 70510523
Genes associated with rs143589452[chr15:39917069], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More