EnhancerDB
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  3. rs143598534[chr17:65525704]
Enhancers that have rs143598534[chr17:65525704]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65492714 65528744 enh17323
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Astrocyte Bone (Osteoblast) Lung (A549) Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs143598534[chr17:65525704]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65525694 65525708 NR2F1 JASPAR yes 55517007
chr17 65525696 65525712 SOX4 JASPAR yes 55517008
chr17 65525700 65525715 SCRT1 JASPAR yes 55517009
chr17 65525701 65525711 FIGLA JASPAR yes 55517010
chr17 65525701 65525711 ID4 JASPAR yes 55517011
chr17 65525701 65525711 TCF3 JASPAR yes 55517012
chr17 65525701 65525711 TCF4 JASPAR yes 55517013
chr17 65525702 65525711 SNAI2 JASPAR yes 55517014
chr17 65525702 65525715 SCRT2 JASPAR yes 55517015
chr17 65525703 65525708 USF2 TRANSFAC yes 55517016
chr17 65525704 65525710 PTF TRANSFAC yes 55517017
Genes associated with rs143598534[chr17:65525704], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More