EnhancerDB
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  3. rs143618902[chr1:1612077]
Enhancers that have rs143618902[chr1:1612077]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1607365 1622353 enh2
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1)
chr1 1611804 1612115 vista43
VISTA
Transcript factors that have rs143618902[chr1:1612077]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1611661 1612110 TCF7L2 GTRD no Colon (HCT116) 107801795
chr1 1612074 1612094 PPARG JASPAR yes 26198150
chr1 1612074 1612094 PPARG JASPAR yes 118215110
Genes associated with rs143618902[chr1:1612077], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More