EnhancerDB
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  3. rs143643504[chr12:116893042]
Enhancers that have rs143643504[chr12:116893042]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116889515 116899995 enh15029
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs143643504[chr12:116893042]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116891546 116893536 ZNF143 GTRD no Epithelial (MCF-7) 108061659
chr12 116892538 116893134 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21577044
chr12 116892679 116893143 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21577046
chr12 116892792 116893048 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21577047
chr12 116893027 116893044 RXRA JASPAR yes 123997460
chr12 116893031 116893046 NR2C2 JASPAR yes 123997461
Genes associated with rs143643504[chr12:116893042], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More