EnhancerDB
  1. Home
  2. SNP
  3. rs143656548[chr1:110428598]
Enhancers that have rs143656548[chr1:110428598]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110412890 110446635 enh12129
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs143656548[chr1:110428598]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110428189 110428739 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328247
chr1 110428340 110428640 ZNF274 GTRD no Liver (HepG2) 21328253
chr1 110428590 110428605 NR2C2 JASPAR yes 31449981
chr1 110428598 110428612 PLAG1 JASPAR yes 31449982
Genes associated with rs143656548[chr1:110428598], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More