EnhancerDB
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  3. rs143659669[chr12:52610091]
Enhancers that have rs143659669[chr12:52610091]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143659669[chr12:52610091]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52609804 52610321 REST UCSC Txn Factor no Conserved 108033751
chr12 52609804 52610321 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033752
chr12 52609947 52610248 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21546807
chr12 52609958 52610220 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546808
chr12 52609966 52610233 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21546809
chr12 52610083 52610104 REST JASPAR yes 120929185
chr12 52610087 52610096 SOX9 JASPAR yes 120929186
chr12 52610088 52610104 SOX8 JASPAR yes 120929187
Genes associated with rs143659669[chr12:52610091], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More