EnhancerDB
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  3. rs143662908[chr17:78002378]
Enhancers that have rs143662908[chr17:78002378]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77991905 78006935 enh44506
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Lung (PC-9) Esophagus Lung Stomach Muscle (A673) Thyroid Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs143662908[chr17:78002378]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78002360 78002378 RARA JASPAR yes 56239147
chr17 78002361 78002382 IRF1 JASPAR yes 56239148
chr17 78002365 78002380 PRDM1 JASPAR yes 56239149
chr17 78002365 78002380 STAT2 JASPAR yes 56239150
chr17 78002366 78002378 IRF1 JASPAR yes 56239151
Genes associated with rs143662908[chr17:78002378], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More