EnhancerDB
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  3. rs143685019[chr1:225942489]
Enhancers that have rs143685019[chr1:225942489]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225938095 225960315 enh12725
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143685019[chr1:225942489]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225941037 225946019 STAT3 GTRD no Blood (OCI-LY7) 21385734
chr1 225942359 225943098 SOX2 GTRD no Neural Stem Cells (H9) 21385748
chr1 225942403 225943099 SOX2 GTRD no Neural Stem Cells (H9) 21385749
chr1 225942415 225942917 SOX2 GTRD no Neural Stem Cells (H9) 21385750
chr1 225942418 225943035 SOX2 GTRD no Neural Stem Cells (H9) 21385751
chr1 225942428 225942884 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21385752
chr1 225942483 225942494 E2F4 JASPAR yes 35767625
chr1 225942483 225942497 E2F7 JASPAR yes 35767626
chr1 225942484 225942495 E2F1 JASPAR yes 35767627
Genes associated with rs143685019[chr1:225942489], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More