EnhancerDB
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  3. rs143687610[chr1:232765705]
Enhancers that have rs143687610[chr1:232765705]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
chr1 232765644 232766127 vista5563
VISTA
Transcript factors that have rs143687610[chr1:232765705]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232765428 232766200 ZNF263 UCSC Txn Factor no Conserved 107879436
chr1 232765646 232766655 POLR2A UCSC Txn Factor no Conserved 107879437
chr1 232765678 232766035 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107879438
chr1 232765694 232765951 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21392302
chr1 232765694 232765951 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107879439
chr1 232765696 232765886 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21392303
chr1 232765696 232765886 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107879440
chr1 232765699 232765710 TFAP2A JASPAR yes 36179603
chr1 232765699 232765710 TFAP2B JASPAR yes 36179604
chr1 232765699 232765710 TFAP2C JASPAR yes 36179605
chr1 232765699 232765710 TFAP2A JASPAR yes 118481107
chr1 232765699 232765710 TFAP2B JASPAR yes 118481108
chr1 232765699 232765710 TFAP2C JASPAR yes 118481109
chr1 232765700 232765709 TFAP2A JASPAR yes 36179606
chr1 232765700 232765709 TFAP2A JASPAR yes 118481110
chr1 232765704 232765714 NFKB1 JASPAR yes 36179607
chr1 232765704 232765714 NFKB1 JASPAR yes 118481111
chr1 232765704 232765715 NFKB1 JASPAR yes 36179608
chr1 232765704 232765715 NFKB1 JASPAR yes 118481112
Genes associated with rs143687610[chr1:232765705], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More