EnhancerDB
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  3. rs143714493[chr16:89397340]
Enhancers that have rs143714493[chr16:89397340]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143714493[chr16:89397340]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89396924 89399626 ZNF274 GTRD no Blood (GM12878) 21738271
chr16 89396924 89399626 ZNF274 GTRD no Blood (GM12878) 108225732
chr16 89397032 89398086 TCF7L2 GTRD no Colon (HCT116) 21738273
chr16 89397032 89398086 TCF7L2 GTRD no Colon (HCT116) 108225734
chr16 89397036 89398028 ZNF143 GTRD no Epithelial (MCF-7) 21738274
chr16 89397036 89398028 ZNF143 GTRD no Epithelial (MCF-7) 108225735
chr16 89397081 89397792 TCF7L2 GTRD no Colon (HCT116) 21738275
chr16 89397081 89397792 TCF7L2 GTRD no Colon (HCT116) 108225736
chr16 89397094 89398009 ZNF143 GTRD no Epithelial (MCF-7) 21738276
chr16 89397094 89398009 ZNF143 GTRD no Epithelial (MCF-7) 108225737
chr16 89397326 89397340 IRF7 JASPAR yes 12332233
chr16 89397330 89397343 POU3F3 JASPAR yes 12332234
Genes associated with rs143714493[chr16:89397340], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More