EnhancerDB
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  3. rs143742405[chr2:28872469]
Enhancers that have rs143742405[chr2:28872469]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143742405[chr2:28872469]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28872457 28872471 JUN JASPAR yes 72664093
chr2 28872460 28872471 FOSL2 JASPAR yes 72664094
chr2 28872460 28872471 JUNB JASPAR yes 72664095
chr2 28872461 28872472 FOS JASPAR yes 72664096
chr2 28872461 28872472 FOSL1 JASPAR yes 72664097
chr2 28872461 28872472 JUND JASPAR yes 72664098
chr2 28872461 28872472 NFE2 JASPAR yes 72664099
chr2 28872462 28872469 JUN TRANSFAC yes 72664100
chr2 28872462 28872471 JDP2 JASPAR yes 72664101
chr2 28872462 28872473 FOSL2 JASPAR yes 72664102
chr2 28872462 28872473 JUNB JASPAR yes 72664103
Genes associated with rs143742405[chr2:28872469], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More