EnhancerDB
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  3. rs143744047[chr12:52608055]
Enhancers that have rs143744047[chr12:52608055]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143744047[chr12:52608055]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52606625 52609363 ZNF143 GTRD no Epithelial (MCF-7) 21546725
chr12 52606625 52609363 ZNF143 GTRD no Epithelial (MCF-7) 108033682
chr12 52607436 52608287 ZNF143 GTRD no Epithelial (MCF-7) 21546751
chr12 52607463 52608228 ZNF143 GTRD no Epithelial (MCF-7) 21546752
chr12 52607494 52608065 ZNF143 GTRD no Epithelial (MCF-7) 21546753
chr12 52607497 52608217 ZNF143 GTRD no Epithelial (MCF-7) 21546754
chr12 52607617 52608060 ZNF143 GTRD no Epithelial (MCF-7) 21546756
chr12 52607936 52608613 TCF7L2 GTRD no Colon (HCT116) 21546758
chr12 52608049 52608059 BHLHE40 JASPAR yes 120928900
chr12 52608049 52608059 CLOCK JASPAR yes 120928901
chr12 52608049 52608059 HEY1 JASPAR yes 120928902
chr12 52608049 52608059 MAX JASPAR yes 120928903
chr12 52608049 52608059 MNT JASPAR yes 120928904
chr12 52608051 52608056 MYC TRANSFAC yes 120928905
chr12 52608051 52608056 USF1 TRANSFAC yes 120928906
chr12 52608051 52608056 USF2 TRANSFAC yes 120928907
chr12 52608052 52608060 MGA JASPAR yes 120928908
chr12 52608052 52608060 TBX1 JASPAR yes 120928909
Genes associated with rs143744047[chr12:52608055], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More