EnhancerDB
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  3. rs143802568[chr1:27465948]
Enhancers that have rs143802568[chr1:27465948]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27456674 27477960 enh171
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143802568[chr1:27465948]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27465935 27465948 TFAP2A JASPAR yes 27680794
chr1 27465935 27465948 TFAP2B JASPAR yes 27680795
chr1 27465935 27465948 TFAP2C JASPAR yes 27680796
Genes associated with rs143802568[chr1:27465948], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More