EnhancerDB
  1. Home
  2. SNP
  3. rs143809359[chr16:89542889]
Enhancers that have rs143809359[chr16:89542889]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89534745 89554855 enh32031
Liver Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs143809359[chr16:89542889]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89542872 89542893 IRF1 JASPAR yes 12348642
chr16 89542874 89542889 IRF9 JASPAR yes 12348643
chr16 89542877 89542889 IRF1 JASPAR yes 12348644
Genes associated with rs143809359[chr16:89542889], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More