EnhancerDB
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  3. rs143839708[chr1:27465585]
Enhancers that have rs143839708[chr1:27465585]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27456674 27477960 enh171
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143839708[chr1:27465585]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27465580 27465586 SP1 TRANSFAC yes 27680739
chr1 27465580 27465590 SP1 JASPAR yes 27680740
chr1 27465581 27465593 ZBTB7A JASPAR yes 27680741
chr1 27465582 27465587 SP1 TRANSFAC yes 27680742
chr1 27465584 27465598 ZIC1 JASPAR yes 27680743
chr1 27465584 27465599 ZIC4 JASPAR yes 27680744
Genes associated with rs143839708[chr1:27465585], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More