EnhancerDB
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  3. rs143842717[chr19:2554178]
Enhancers that have rs143842717[chr19:2554178]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143842717[chr19:2554178]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2554171 2554179 FOXL1 JASPAR yes 112074026
chr19 2554177 2554181 YY1 TRANSFAC yes 112074027
chr19 2554177 2554192 FOXP1 JASPAR yes 112074028
Genes associated with rs143842717[chr19:2554178], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More