EnhancerDB
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  3. rs143843692[chr2:25513018]
Enhancers that have rs143843692[chr2:25513018]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25506105 25541255 enh18357
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143843692[chr2:25513018]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25513010 25513020 EMX1 JASPAR yes 72462319
chr2 25513010 25513020 GBX2 JASPAR yes 72462320
chr2 25513010 25513020 GSX1 JASPAR yes 72462321
chr2 25513010 25513020 GSX2 JASPAR yes 72462322
chr2 25513010 25513020 HOXB2 JASPAR yes 72462323
chr2 25513010 25513020 HOXB3 JASPAR yes 72462324
chr2 25513010 25513020 MEOX1 JASPAR yes 72462325
chr2 25513010 25513020 MEOX2 JASPAR yes 72462326
chr2 25513010 25513020 MIXL1 JASPAR yes 72462327
chr2 25513010 25513020 MNX1 JASPAR yes 72462328
chr2 25513010 25513021 HOXA10 JASPAR yes 72462329
chr2 25513011 25513019 LMX1A JASPAR yes 72462330
chr2 25513011 25513019 LMX1B JASPAR yes 72462331
chr2 25513011 25513019 NKX6-1 JASPAR yes 72462332
chr2 25513011 25513019 NKX6-2 JASPAR yes 72462333
chr2 25513011 25513019 PDX1 JASPAR yes 72462334
chr2 25513011 25513019 VAX1 JASPAR yes 72462335
chr2 25513011 25513019 VAX2 JASPAR yes 72462336
chr2 25513011 25513019 VSX1 JASPAR yes 72462337
chr2 25513011 25513021 HOXD13 JASPAR yes 72462338
chr2 25513016 25513022 TBP TRANSFAC yes 72462339
Genes associated with rs143843692[chr2:25513018], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr2 25455845 25565459 - DNMT3A ENSG00000119772.12 25565459 0 Spleen 0.369516 2180