EnhancerDB
  1. Home
  2. SNP
  3. rs143861280[chr17:43447999]
Enhancers that have rs143861280[chr17:43447999]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43440002 43455235 enh17189
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Ovary Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs143861280[chr17:43447999]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43446825 43448557 TEF1 GTRD no Bone (Osteoblast) 21765530
chr17 43447989 43448007 RARA JASPAR yes 54449662
chr17 43447996 43448009 NR2F1 JASPAR yes 54449663
Genes associated with rs143861280[chr17:43447999], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More