EnhancerDB
  1. Home
  2. SNP
  3. rs143861300[chr12:52597840]
Enhancers that have rs143861300[chr12:52597840]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr12 52597722 52597879 vista13466
VISTA
Transcript factors that have rs143861300[chr12:52597840]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52597832 52597845 NFKB1 JASPAR yes 82406677
chr12 52597832 52597845 NFKB2 JASPAR yes 82406678
chr12 52597832 52597845 NFKB1 JASPAR yes 120927538
chr12 52597832 52597845 NFKB2 JASPAR yes 120927539
chr12 52597833 52597843 NFKB1 JASPAR yes 82406679
chr12 52597833 52597843 NFKB1 JASPAR yes 120927540
chr12 52597833 52597844 NFKB1 JASPAR yes 82406680
chr12 52597833 52597844 NFKB1 JASPAR yes 120927541
chr12 52597837 52597843 NFE2 TRANSFAC yes 82406681
chr12 52597837 52597843 NFE2 TRANSFAC yes 120927542
Genes associated with rs143861300[chr12:52597840], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More