EnhancerDB
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  3. rs143888733[chr6:33575972]
Enhancers that have rs143888733[chr6:33575972]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 33549445 33581115 enh23159
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs143888733[chr6:33575972]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 33575966 33575980 GLIS2 JASPAR yes 101160562
chr6 33575966 33575980 GLIS3 JASPAR yes 101160563
chr6 33575972 33575985 NR2F1 JASPAR yes 101160564
Genes associated with rs143888733[chr6:33575972], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More