EnhancerDB
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  3. rs143922490[chr12:58226313]
Enhancers that have rs143922490[chr12:58226313]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 58223192 58238686 enh14761
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Large Intestine Blood (GM12878) Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143922490[chr12:58226313]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 58226303 58226316 SMAD2 JASPAR yes 121140778
chr12 58226306 58226316 TBR1 JASPAR yes 121140779
chr12 58226307 58226317 TBX21 JASPAR yes 121140780
chr12 58226308 58226316 MGA JASPAR yes 121140781
chr12 58226308 58226316 TBX15 JASPAR yes 121140782
chr12 58226308 58226316 TBX1 JASPAR yes 121140783
chr12 58226308 58226316 TBX4 JASPAR yes 121140784
chr12 58226308 58226316 TBX5 JASPAR yes 121140785
chr12 58226308 58226317 ZEB1 JASPAR yes 121140786
chr12 58226310 58226319 SNAI2 JASPAR yes 121140787
chr12 58226311 58226316 USF2 TRANSFAC yes 121140788
Genes associated with rs143922490[chr12:58226313], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More