EnhancerDB
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  3. rs143956999[chr17:40405704]
Enhancers that have rs143956999[chr17:40405704]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40390345 40414201 enh4414
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
Transcript factors that have rs143956999[chr17:40405704]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40405699 40405714 MEF2A JASPAR yes 54290114
chr17 40405700 40405715 MEF2C JASPAR yes 54290115
chr17 40405701 40405713 MEF2A JASPAR yes 54290116
chr17 40405701 40405713 MEF2B JASPAR yes 54290117
chr17 40405701 40405713 MEF2D JASPAR yes 54290118
chr17 40405702 40405712 MEF2A JASPAR yes 54290119
chr17 40405703 40405707 YY1 TRANSFAC yes 54290120
Genes associated with rs143956999[chr17:40405704], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More