EnhancerDB
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  3. rs143959568[chr17:55611845]
Enhancers that have rs143959568[chr17:55611845]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143959568[chr17:55611845]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55611832 55611846 PLAG1 JASPAR yes 54965688
chr17 55611840 55611845 SP1 TRANSFAC yes 54965690
chr17 55611843 55611856 NFKB1 JASPAR yes 54965691
chr17 55611845 55611851 ZNF354C JASPAR yes 54965692
Genes associated with rs143959568[chr17:55611845], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More