EnhancerDB
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  3. rs143964234[chr17:76351279]
Enhancers that have rs143964234[chr17:76351279]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76316725 76355075 enh17407
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143964234[chr17:76351279]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76350978 76351720 TCF7L2 GTRD no Colon (HCT116) 21793756
chr17 76351072 76351744 TCF7L2 GTRD no Colon (HCT116) 21793757
chr17 76351089 76351703 TCF7L2 GTRD no Colon (HCT116) 21793758
chr17 76351119 76352549 ZNF274 GTRD no Liver (HepG2) 21793759
chr17 76351180 76355568 ZNF274 GTRD no Liver (HepG2) 21793760
chr17 76351222 76352572 ZNF274 GTRD no Liver (HepG2) 21793761
chr17 76351232 76351568 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21793762
chr17 76351263 76351553 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21793763
chr17 76351267 76351497 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21793764
chr17 76351268 76351280 TFAP2A JASPAR yes 56151937
Genes associated with rs143964234[chr17:76351279], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 76000249 76104916 + TNRC6C ENSG00000078687.12 76000249 246363 Adrenal 0.186686 16300