EnhancerDB
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  3. rs144054090[chr1:8962682]
Enhancers that have rs144054090[chr1:8962682]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8954605 8983075 enh11478
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs144054090[chr1:8962682]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8962678 8962693 HNF4G JASPAR yes 26606467
chr1 8962679 8962694 HNF4A JASPAR yes 26606468
chr1 8962680 8962684 H4TF2 TRANSFAC yes 26606469
Genes associated with rs144054090[chr1:8962682], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More