EnhancerDB
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  3. rs144195109[chr17:78765546]
Enhancers that have rs144195109[chr17:78765546]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs144195109[chr17:78765546]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78765540 78765555 LEF1 JASPAR yes 56280221
chr17 78765541 78765546 ETS2 TRANSFAC yes 56280222
chr17 78765541 78765555 TCF7L2 JASPAR yes 56280223
Genes associated with rs144195109[chr17:78765546], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More