EnhancerDB
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  3. rs144225221[chr1:211780546]
Enhancers that have rs144225221[chr1:211780546]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 211772625 211795095 enh907
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr1 211780151 211780642 vista4970
VISTA
Transcript factors that have rs144225221[chr1:211780546]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 211779549 211780748 POLR2A UCSC Txn Factor no Conserved 107867447
chr1 211779967 211780651 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107867449
chr1 211780204 211780644 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21376432
chr1 211780204 211780644 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867454
chr1 211780212 211780788 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21376433
chr1 211780212 211780788 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867455
chr1 211780215 211780635 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107867457
chr1 211780228 211780564 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21376434
chr1 211780228 211780564 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107867458
chr1 211780239 211780615 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21376435
chr1 211780239 211780615 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867459
chr1 211780246 211780616 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107867460
chr1 211780251 211780621 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21376436
chr1 211780251 211780621 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867461
chr1 211780272 211780557 ZNF274 GTRD no Liver (HepG2) 21376439
chr1 211780272 211780557 ZNF274 GTRD no Liver (HepG2) 107867465
chr1 211780272 211780588 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21376440
chr1 211780272 211780588 GABPA UCSC Txn Factor no Conserved 107867466
chr1 211780272 211780588 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107867467
chr1 211780274 211780604 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107867468
chr1 211780274 211780614 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107867469
chr1 211780293 211780657 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21376442
chr1 211780293 211780657 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867473
chr1 211780301 211780565 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21376444
chr1 211780301 211780565 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867475
chr1 211780311 211780571 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107867477
chr1 211780367 211780602 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21376448
chr1 211780367 211780602 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867482
chr1 211780371 211780714 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21376449
chr1 211780371 211780714 PHF8 UCSC Txn Factor no Conserved 107867483
chr1 211780371 211780714 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867484
chr1 211780399 211780583 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21376451
chr1 211780399 211780583 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867486
chr1 211780532 211780549 RARA JASPAR yes 35070374
chr1 211780532 211780549 RARA JASPAR yes 118451527
chr1 211780536 211780549 SCRT2 JASPAR yes 35070375
chr1 211780536 211780549 SCRT2 JASPAR yes 118451528
chr1 211780536 211780551 SCRT1 JASPAR yes 35070376
chr1 211780536 211780551 SCRT1 JASPAR yes 118451529
chr1 211780540 211780553 NR2F1 JASPAR yes 35070377
chr1 211780540 211780553 NR2F1 JASPAR yes 118451530
chr1 211780544 211780548 ESR1 TRANSFAC yes 35070378
chr1 211780544 211780548 ESR1 TRANSFAC yes 118451531
chr1 211780546 211780558 TAL1 JASPAR yes 35070379
chr1 211780546 211780558 TAL1 JASPAR yes 118451532
Genes associated with rs144225221[chr1:211780546], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More