EnhancerDB
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  3. rs144230170[chr1:225652139]
Enhancers that have rs144230170[chr1:225652139]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs144230170[chr1:225652139]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225650829 225656613 ZBTB33 GTRD no Lung (A549) 107874230
chr1 225651064 225652472 ZNF274 GTRD no Cervix (HeLa-S3) 21384815
chr1 225651086 225654242 ZBTB33 GTRD no Brain (SK-N-SH) 21384816
chr1 225651110 225652296 ZBTB33 GTRD no Brain (SK-N-SH) 21384817
chr1 225651124 225656651 ZBTB33 GTRD no Lung (A549) 107874231
chr1 225651132 225652373 ZNF274 GTRD no Cervix (HeLa-S3) 21384818
chr1 225651156 225656546 ZBTB33 GTRD no Lung (A549) 107874232
chr1 225651177 225654374 ZBTB33 GTRD no Brain (SK-N-SH) 21384819
chr1 225651185 225652392 ZNF274 GTRD no Cervix (HeLa-S3) 21384820
chr1 225651222 225652228 ZNF274 GTRD no Cervix (HeLa-S3) 21384821
chr1 225651276 225652164 ZNF274 GTRD no Cervix (HeLa-S3) 21384822
chr1 225651295 225652673 ZBTB33 GTRD no Brain (SK-N-SH) 21384823
chr1 225651326 225653435 ZNF274 GTRD no Cervix (HeLa-S3) 21384825
chr1 225651333 225654603 ZBTB33 GTRD no Brain (SK-N-SH) 21384826
chr1 225651356 225654907 ZBTB33 GTRD no Lung (A549) 107874233
chr1 225651361 225652330 ZNF274 GTRD no Cervix (HeLa-S3) 21384828
chr1 225651368 225652859 ZNF274 GTRD no Liver (HepG2) 21384829
chr1 225651370 225652701 ZBTB33 GTRD no Brain (SK-N-SH) 21384830
chr1 225651415 225654922 ZBTB33 GTRD no Lung (A549) 107874234
chr1 225651465 225652639 ZNF274 GTRD no Cervix (HeLa-S3) 21384831
chr1 225651543 225654917 ZBTB33 GTRD no Lung (A549) 107874235
chr1 225651547 225653821 ZNF274 GTRD no Bone Marrow (K562) 21384835
chr1 225651552 225654335 ZBTB33 GTRD no Brain (SK-N-SH) 21384836
chr1 225651591 225654242 ZNF274 GTRD no Liver (HepG2) 21384837
chr1 225651756 225652678 ZNF274 GTRD no Liver (HepG2) 21384839
chr1 225651812 225652291 ZNF274 GTRD no Liver (HepG2) 21384842
chr1 225651819 225652473 ZNF274 GTRD no Cervix (HeLa-S3) 21384843
chr1 225651842 225652355 ZNF274 GTRD no Cervix (HeLa-S3) 21384844
chr1 225651845 225652299 ZBTB33 GTRD no Brain (SK-N-SH) 21384845
chr1 225651860 225652235 ZNF274 GTRD no Liver (HepG2) 21384846
chr1 225651903 225652235 ZNF274 GTRD no Liver (HepG2) 21384847
chr1 225651913 225654315 ZBTB33 GTRD no Brain (SK-N-SH) 21384848
chr1 225651931 225652336 ZNF274 GTRD no Cervix (HeLa-S3) 21384849
chr1 225651932 225654158 ZNF274 GTRD no Liver (HepG2) 21384850
chr1 225651952 225652290 ZNF274 GTRD no Cervix (HeLa-S3) 21384851
chr1 225651956 225652196 ZNF274 GTRD no Liver (HepG2) 21384852
chr1 225651972 225654359 ZNF274 GTRD no Liver (HepG2) 21384853
chr1 225651977 225652321 ZNF274 GTRD no Liver (HepG2) 21384854
chr1 225651978 225652285 ZNF274 GTRD no Liver (HepG2) 21384855
chr1 225652004 225654254 ZNF274 GTRD no Liver (HepG2) 21384856
chr1 225652038 225653387 ZNF274 GTRD no Liver (HepG2) 21384857
chr1 225652049 225654239 ZNF143 GTRD no Epithelial (MCF-7) 21384858
chr1 225652061 225652687 ZNF274 GTRD no Bone Marrow (K562) 21384859
chr1 225652118 225653923 TCF7L2 GTRD no Colon (HCT116) 21384860
chr1 225652121 225652140 PAX5 JASPAR yes 35743799
chr1 225652129 225652145 ZNF143 JASPAR yes 35743800
chr1 225652136 225652149 SMAD2 JASPAR yes 35743801
Genes associated with rs144230170[chr1:225652139], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More