EnhancerDB
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  3. rs144231486[chr1:204072723]
Enhancers that have rs144231486[chr1:204072723]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204045525 204080675 enh12573
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs144231486[chr1:204072723]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204072244 204075553 TCF7L2 GTRD no Colon (HCT116) 21370170
chr1 204072244 204075553 TCF7L2 GTRD no Colon (HCT116) 107859641
chr1 204072325 204075054 TCF7L2 GTRD no Colon (HCT116) 21370171
chr1 204072325 204075054 TCF7L2 GTRD no Colon (HCT116) 107859642
chr1 204072326 204075632 TCF7L2 GTRD no Colon (HCT116) 21370172
chr1 204072326 204075632 TCF7L2 GTRD no Colon (HCT116) 107859643
chr1 204072327 204075533 TCF7L2 GTRD no Colon (HCT116) 21370173
chr1 204072327 204075533 TCF7L2 GTRD no Colon (HCT116) 107859644
chr1 204072348 204075940 ZNF274 GTRD no Cervix (HeLa-S3) 21370174
chr1 204072348 204075940 ZNF274 GTRD no Cervix (HeLa-S3) 107859645
chr1 204072359 204075514 TCF7L2 GTRD no Colon (HCT116) 21370175
chr1 204072359 204075514 TCF7L2 GTRD no Colon (HCT116) 107859646
chr1 204072392 204077605 ZNF143 GTRD no Epithelial (MCF-7) 21370176
chr1 204072392 204077605 ZNF143 GTRD no Epithelial (MCF-7) 107859647
chr1 204072512 204075869 ZNF143 GTRD no Epithelial (MCF-7) 21370177
chr1 204072512 204075869 ZNF143 GTRD no Epithelial (MCF-7) 107859648
chr1 204072587 204077369 ZNF143 GTRD no Epithelial (MCF-7) 21370178
chr1 204072587 204077369 ZNF143 GTRD no Epithelial (MCF-7) 107859649
chr1 204072624 204075394 ZNF143 GTRD no Epithelial (MCF-7) 21370179
chr1 204072624 204075394 ZNF143 GTRD no Epithelial (MCF-7) 107859650
chr1 204072654 204075875 ZNF143 GTRD no Epithelial (MCF-7) 21370180
chr1 204072654 204075875 ZNF143 GTRD no Epithelial (MCF-7) 107859651
chr1 204072664 204074879 ZNF143 GTRD no Epithelial (MCF-7) 21370181
chr1 204072664 204074879 ZNF143 GTRD no Epithelial (MCF-7) 107859652
chr1 204072666 204075510 ZNF143 GTRD no Epithelial (MCF-7) 21370182
chr1 204072666 204075510 ZNF143 GTRD no Epithelial (MCF-7) 107859653
chr1 204072670 204074143 TCF7L2 GTRD no Colon (HCT116) 21370183
chr1 204072670 204074143 TCF7L2 GTRD no Colon (HCT116) 107859654
chr1 204072692 204075599 ZNF143 GTRD no Epithelial (MCF-7) 21370184
chr1 204072692 204075599 ZNF143 GTRD no Epithelial (MCF-7) 107859655
chr1 204072711 204075500 ZNF274 GTRD no Cervix (HeLa-S3) 21370185
chr1 204072711 204075500 ZNF274 GTRD no Cervix (HeLa-S3) 107859656
chr1 204072720 204072736 RFX4 JASPAR yes 34680369
chr1 204072721 204075685 ZNF274 GTRD no Cervix (HeLa-S3) 21370186
chr1 204072721 204075685 ZNF274 GTRD no Cervix (HeLa-S3) 107859657
Genes associated with rs144231486[chr1:204072723], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More