EnhancerDB
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  3. rs144240965[chr1:223894405]
Enhancers that have rs144240965[chr1:223894405]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs144240965[chr1:223894405]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223894393 223894413 TBX19 JASPAR yes 35670283
chr1 223894395 223894411 T JASPAR yes 35670284
chr1 223894402 223894413 TBX20 JASPAR yes 35670285
chr1 223894403 223894418 HNF4A JASPAR yes 35670286
Genes associated with rs144240965[chr1:223894405], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 224415036 224518089 - NVL ENSG00000143748.13 224518089 520631 Esophagus 0.795428 1880