EnhancerDB
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  3. rs144355520[chr12:52550643]
Enhancers that have rs144355520[chr12:52550643]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs144355520[chr12:52550643]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52550402 52550906 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546518
chr12 52550505 52550969 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546519
chr12 52550542 52550918 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21546520
chr12 52550614 52550884 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21546521
chr12 52550624 52550853 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546522
chr12 52550625 52550829 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546523
chr12 52550627 52550814 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21546524
chr12 52550637 52550656 REST JASPAR yes 120923277
chr12 52550639 52550654 RFX5 JASPAR yes 120923278
Genes associated with rs144355520[chr12:52550643], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More