EnhancerDB
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  3. rs144396840[chr17:39814230]
Enhancers that have rs144396840[chr17:39814230]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39800139 39815735 enh17152
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs144396840[chr17:39814230]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39814214 39814233 REST JASPAR yes 54269412
chr17 39814215 39814235 RREB1 JASPAR yes 54269413
chr17 39814218 39814232 GLIS2 JASPAR yes 54269414
chr17 39814218 39814232 GLIS3 JASPAR yes 54269415
chr17 39814218 39814233 RUNX2 JASPAR yes 54269416
Genes associated with rs144396840[chr17:39814230], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More