EnhancerDB
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  3. rs144503294[chr19:2525821]
Enhancers that have rs144503294[chr19:2525821]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs144503294[chr19:2525821]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2523151 2525874 ZBTB33 GTRD no Lung (A549) 21835976
chr19 2523151 2525874 ZBTB33 GTRD no Lung (A549) 108360947
chr19 2523257 2525886 ZBTB33 GTRD no Lung (A549) 21835977
chr19 2523257 2525886 ZBTB33 GTRD no Lung (A549) 108360948
chr19 2523352 2525828 ZBTB33 GTRD no Lung (A549) 21835979
chr19 2523352 2525828 ZBTB33 GTRD no Lung (A549) 108360950
chr19 2523387 2525995 ZBTB33 GTRD no Lung (A549) 21835981
chr19 2523387 2525995 ZBTB33 GTRD no Lung (A549) 108360952
chr19 2523412 2526155 ZNF274 GTRD no Cervix (HeLa-S3) 21835983
chr19 2523412 2526155 ZNF274 GTRD no Cervix (HeLa-S3) 108360954
chr19 2523431 2526345 TCF7L2 GTRD no Colon (HCT116) 21835984
chr19 2523431 2526345 TCF7L2 GTRD no Colon (HCT116) 108360956
chr19 2523457 2525934 ZBTB33 GTRD no Lung (A549) 21835985
chr19 2523457 2525934 ZBTB33 GTRD no Lung (A549) 108360957
chr19 2523459 2526134 ZBTB33 GTRD no Lung (A549) 21835986
chr19 2523459 2526134 ZBTB33 GTRD no Lung (A549) 108360958
chr19 2523499 2526006 TCF7L2 GTRD no Colon (HCT116) 21835987
chr19 2523499 2526006 TCF7L2 GTRD no Colon (HCT116) 108360959
chr19 2524130 2526428 ZNF143 GTRD no Epithelial (MCF-7) 21835998
chr19 2524130 2526428 ZNF143 GTRD no Epithelial (MCF-7) 108360973
chr19 2524179 2525838 ZNF274 GTRD no Cervix (HeLa-S3) 21836007
chr19 2524179 2525838 ZNF274 GTRD no Cervix (HeLa-S3) 108360982
chr19 2524218 2525969 ZNF274 GTRD no Cervix (HeLa-S3) 21836011
chr19 2524218 2525969 ZNF274 GTRD no Cervix (HeLa-S3) 108360988
chr19 2524326 2525962 ZNF143 GTRD no Epithelial (MCF-7) 21836026
chr19 2524326 2525962 ZNF143 GTRD no Epithelial (MCF-7) 108361007
chr19 2524364 2525946 ZNF274 GTRD no Cervix (HeLa-S3) 21836030
chr19 2524364 2525946 ZNF274 GTRD no Cervix (HeLa-S3) 108361011
chr19 2524365 2525899 TCF7L2 GTRD no Colon (HCT116) 21836031
chr19 2524365 2525899 TCF7L2 GTRD no Colon (HCT116) 108361012
chr19 2524402 2525965 ZNF143 GTRD no Epithelial (MCF-7) 21836035
chr19 2524402 2525965 ZNF143 GTRD no Epithelial (MCF-7) 108361017
chr19 2524488 2525986 ZNF274 GTRD no Cervix (HeLa-S3) 21836043
chr19 2524488 2525986 ZNF274 GTRD no Cervix (HeLa-S3) 108361027
chr19 2524548 2525877 ZNF143 GTRD no Epithelial (MCF-7) 21836062
chr19 2524548 2525877 ZNF143 GTRD no Epithelial (MCF-7) 108361046
chr19 2524610 2526132 TCF7L2 GTRD no Colon (HCT116) 21836069
chr19 2524610 2526132 TCF7L2 GTRD no Colon (HCT116) 108361055
chr19 2524637 2525884 ZNF274 GTRD no Bone Marrow (K562) 21836072
chr19 2524637 2525884 ZNF274 GTRD no Bone Marrow (K562) 108361058
chr19 2524662 2525868 ZNF143 GTRD no Epithelial (MCF-7) 21836081
chr19 2524662 2525868 ZNF143 GTRD no Epithelial (MCF-7) 108361068
chr19 2524692 2526287 TCF7L2 GTRD no Colon (HCT116) 21836093
chr19 2524692 2526287 TCF7L2 GTRD no Colon (HCT116) 108361081
chr19 2524741 2526158 TCF7L2 GTRD no Colon (HCT116) 21836106
chr19 2524741 2526158 TCF7L2 GTRD no Colon (HCT116) 108361094
chr19 2524842 2526268 TCF7L2 GTRD no Colon (HCT116) 21836142
chr19 2524842 2526268 TCF7L2 GTRD no Colon (HCT116) 108361133
chr19 2525809 2525830 IRF1 JASPAR yes 112069134
Genes associated with rs144503294[chr19:2525821], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More