EnhancerDB
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  3. rs144572679[chr6:12344332]
Enhancers that have rs144572679[chr6:12344332]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12340945 12361575 enh38802
Astrocyte Colon (HCT116) Pancreas Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs144572679[chr6:12344332]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12343445 12344467 EP300 UCSC Txn Factor no Conserved 108538543
chr6 12343499 12344451 TCF12 UCSC Txn Factor no Conserved 108538545
chr6 12344323 12344338 TFAP2A JASPAR yes 99963381
chr6 12344326 12344338 TFAP2A JASPAR yes 99963382
chr6 12344326 12344338 TFAP2B JASPAR yes 99963383
chr6 12344326 12344338 TFAP2C JASPAR yes 99963384
chr6 12344326 12344341 TFAP2A JASPAR yes 99963385
chr6 12344327 12344336 TFAP2A JASPAR yes 99963386
chr6 12344327 12344347 ESR1 JASPAR yes 99963387
chr6 12344328 12344337 TFAP2A JASPAR yes 99963388
chr6 12344330 12344348 ESR2 JASPAR yes 99963389
chr6 12344331 12344348 ESR1 JASPAR yes 99963390
chr6 12344331 12344349 ESR2 JASPAR yes 99963391
chr6 12344332 12344347 ESR2 JASPAR yes 99963392
Genes associated with rs144572679[chr6:12344332], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More