EnhancerDB
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  3. rs144855250[chr17:34234083]
Enhancers that have rs144855250[chr17:34234083]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 34213485 34236135 enh17119
Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs144855250[chr17:34234083]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 34233908 34235052 SOX2 GTRD no Neural Stem Cells (H9) 21751126
chr17 34233967 34235051 SOX2 GTRD no Neural Stem Cells (H9) 21751127
chr17 34234012 34234202 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21751128
chr17 34234069 34234526 SOX2 GTRD no Neural Stem Cells (H9) 21751129
chr17 34234077 34234087 FIGLA JASPAR yes 54021517
chr17 34234077 34234087 ID4 JASPAR yes 54021518
chr17 34234077 34234087 MSC JASPAR yes 54021519
chr17 34234077 34234087 TCF3 JASPAR yes 54021520
chr17 34234077 34234087 TCF4 JASPAR yes 54021521
chr17 34234077 34235044 SOX2 GTRD no Neural Stem Cells (H9) 21751130
chr17 34234078 34234087 SNAI2 JASPAR yes 54021522
chr17 34234079 34234084 USF2 TRANSFAC yes 54021523
Genes associated with rs144855250[chr17:34234083], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More