EnhancerDB
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  3. rs144912236[chr19:13962430]
Enhancers that have rs144912236[chr19:13962430]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs144912236[chr19:13962430]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13961555 13963254 TCF7L2 GTRD no Colon (HCT116) 21852649
chr19 13961768 13962448 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852660
chr19 13961783 13964126 TCF7L2 GTRD no Colon (HCT116) 21852661
chr19 13961785 13963314 TCF7L2 GTRD no Colon (HCT116) 21852662
chr19 13961805 13964332 TCF7L2 GTRD no Colon (HCT116) 21852665
chr19 13961822 13964144 TCF7L2 GTRD no Colon (HCT116) 21852666
chr19 13961916 13963237 TCF7L2 GTRD no Colon (HCT116) 21852677
chr19 13961949 13962465 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852686
chr19 13962010 13962545 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852706
chr19 13962114 13962470 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852721
chr19 13962141 13962637 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852722
chr19 13962152 13963540 ZNF274 GTRD no Bone Marrow (K562) 21852723
chr19 13962189 13962493 ZNF274 GTRD no Blood (GM12878) 21852724
chr19 13962262 13962717 TCF7L2 GTRD no Colon (HCT116) 21852725
chr19 13962301 13963257 TCF7L2 GTRD no Colon (HCT116) 21852726
chr19 13962322 13963374 TCF7L2 GTRD no Colon (HCT116) 21852727
chr19 13962330 13962574 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852728
Genes associated with rs144912236[chr19:13962430], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More