EnhancerDB
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  3. rs144942524[chr16:27378494]
Enhancers that have rs144942524[chr16:27378494]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 27372645 27392475 enh16615
Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs144942524[chr16:27378494]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 27376767 27379412 ZNF274 GTRD no Blood (GM12878) 21700877
chr16 27377095 27378691 ZNF274 GTRD no Blood (GM12878) 21700878
chr16 27377123 27378596 ZNF274 GTRD no Blood (GM12878) 21700879
chr16 27377187 27378633 ZNF274 GTRD no Blood (GM12878) 21700881
chr16 27377191 27378631 ZNF274 GTRD no Blood (GM12878) 21700882
chr16 27377267 27378642 ZNF274 GTRD no Blood (GM12878) 21700883
chr16 27377272 27378632 ZNF274 GTRD no Blood (GM12878) 21700884
chr16 27377294 27378651 STAT3 GTRD no Blood (OCI-LY7) 21700886
chr16 27377374 27378565 ZNF274 GTRD no Blood (GM12878) 21700887
chr16 27377393 27378572 ZNF274 GTRD no Blood (GM12878) 21700889
chr16 27377469 27378501 ZNF274 GTRD no Blood (GM12878) 21700890
chr16 27377941 27378505 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21700899
chr16 27378060 27378496 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21700900
chr16 27378171 27378571 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21700902
chr16 27378477 27378497 ESR1 JASPAR yes 10188774
Genes associated with rs144942524[chr16:27378494], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 27561454 27791690 + KIAA0556 ENSG00000047578.8 27561454 182960 Thyroid 0.0901165 14671