EnhancerDB
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  3. rs145158327[chr12:52600297]
Enhancers that have rs145158327[chr12:52600297]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs145158327[chr12:52600297]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52600291 52600299 TBX5 JASPAR yes 120927813
chr12 52600291 52600300 ZEB1 JASPAR yes 120927814
chr12 52600291 52600303 PKNOX1 JASPAR yes 120927815
chr12 52600292 52600302 FIGLA JASPAR yes 120927816
chr12 52600292 52600302 ID4 JASPAR yes 120927817
chr12 52600292 52600302 TCF3 JASPAR yes 120927818
chr12 52600292 52600302 TCF4 JASPAR yes 120927819
chr12 52600293 52600302 SNAI2 JASPAR yes 120927820
chr12 52600294 52600299 USF2 TRANSFAC yes 120927821
chr12 52600297 52600301 NFE TRANSFAC yes 120927822
Genes associated with rs145158327[chr12:52600297], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More