EnhancerDB
  1. Home
  2. SNP
  3. rs145449522[chr1:185611684]
Enhancers that have rs145449522[chr1:185611684]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185611645 185629075 enh12480
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs145449522[chr1:185611684]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185610678 185611717 TEF1 GTRD no Bone (Osteoblast) 21359402
chr1 185611681 185611690 NKX3-2 JASPAR yes 33829411
Genes associated with rs145449522[chr1:185611684], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More