EnhancerDB
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  3. rs145541823[chr1:224386401]
Enhancers that have rs145541823[chr1:224386401]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224381693 224395855 enh12716
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs145541823[chr1:224386401]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224385868 224386702 TEF1 GTRD no Bone (Osteoblast) 21384195
chr1 224385916 224386528 ZNF274 GTRD no Bone Marrow (K562) 21384196
chr1 224386022 224386582 ZNF274 GTRD no Cervix (HeLa-S3) 21384197
chr1 224386300 224386632 ZNF143 GTRD no Epithelial (MCF-7) 21384198
chr1 224386352 224386623 ZNF143 GTRD no Epithelial (MCF-7) 21384199
chr1 224386367 224386681 ZNF143 GTRD no Epithelial (MCF-7) 21384200
chr1 224386394 224386404 ALX3 JASPAR yes 35692747
chr1 224386394 224386404 ESX1 JASPAR yes 35692748
chr1 224386394 224386404 HESX1 JASPAR yes 35692749
chr1 224386395 224386403 DLX6 JASPAR yes 35692750
chr1 224386395 224386403 MSX2 JASPAR yes 35692751
Genes associated with rs145541823[chr1:224386401], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More